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nf-core/magmap

Best-practice analysis pipeline for mapping reads to a (large) collections of genomes

Launch version 1.0.0 https://github.com/nf-core/magmap
  • Introduction
  • Usage
  • Parameters
  • Output
  • Results
  • Releases
    • 1.0.0
Introduction Usage Parameters Output Results Releases
  • 1.0.0

Version history

Download .zip Download .tar.gz View on GitHub

Contributors

  • @danilodileo
  • @emnilsson
  • @erikrikarddaniel

Full Changelog: https://github.com/nf-core/magmap/commits/release

run with
See the docs on how to configure the Seqera Platform CLI.
  • nf-core
  • Nextflow
  • Seqera Platform
subscribers
178
stars
9
open issues
5
open PRs
1
last release
about 11 hours ago
last update
about 11 hours ago
included modules
bbmap_alignbbmap_bbdukbbmap_indexcat_catcat_fastq and 16 more modules
included subworkflows
bam_sort_stats_samtoolsbam_stats_samtoolsutils_nextflow_pipelineutils_nfcore_pipelineutils_nfschema_plugin
contributors
Github user erikrikarddaniel
Github user danilodileo
Github user emnilsson
Github user jfy133
Github user mariaTsontaki
get help
Ask a question on Slack Open an issue on GitHub
Making awesome workflows since 2018.

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See the source code for this website on GitHub:
https://github.com/nf-core/website