modules_config

PipelineLint.modules_config() → Dict[str, List[str]]

Make sure the conf/modules.config file follows the nf-core template, especially removed sections.

Note

You can choose to ignore this lint tests by editing the file called .nf-core.yml in the root of your pipeline and setting the test to false:

lint:
  modules_config: False

To disable this test only for specific modules, you can specify a list of module names.

lint:
  modules_config:
    - fastqc